F1ach: Too Human, great game with odd controls, but when you get used to them, you wonder why more games don't use them, awesome combat rpg.
Alpha Protocol, just awesomeness on a stick, got a lot of unjustified hate at release, great game.
Coelocanth: I'd have to say:
Alpha Protocol Two Worlds Came in here just like I do all "underrated gems" "great games no one played" etc etc to mention Alpha Protocol ;) I've probably said this to one or both of you before too, but I'm always happy to see it pop up on other peoples' minds as well.
Agree on Two Worlds and Too Human. Loved the huge amount of loot in both games. Love the world and lore of Too Human. I think the problem with that one was that it promised too much and felt a bit short and same-y. Needed a bit more to differentiate the classes and a few more abilities. If it were released today, it would have been a huge hit. Back then it just felt watered down.
Oh and I did like the "X-Com" shooter as well as the first Godfather game. The Godfather is one of my favorite open world sandbox games (I don't play that many).