Whenever I travel between room, I encounter an odd hiccup in the new room. The audio of the door closing behind me will stutter five times or so before completing.
"sque-sque-sque-sque-sueak slam*
Any idea what settings might be causing this?

I communicated with Agustin Cordes, and he helped me solve the issue. The audio buffer wasn't large enough, so I edited the config file and everything works properly now.
If someone else has the same issue and needs to make this fix, please note that due to a bug, saved games will overwrte the config data when loaded, so you would have to make a new game in order to not reset the config file after adjusting the buffer value.

Where is the config file located? i cant seem to find it in the install directory

A little late but it might help others:
C:\Users\[user name]\AppData\Roaming\Nucleosys\Scratches Director's Cut

Obviously, you have to change [user name] to your actual windows user name.