In TEMIM I remember the game having white names for puzzles that were not yet solved and turning green as I solved them. In this package, the all start out with green titles except for the locked puzzles 89+. Why is this, and can it be fixed?

I remember someone had posted the same thing here. The reply was that it's an expansion to the first game, so all the puzzle that was in the first are automatically unlocked.
I don't think you can fix this

Original TIM1 had only 87 puzzles. TEMIM have 160, but all original puzzles and first new one (88) are already unlocked. If you want, you can enter password AWE to unlock all 160 puzzles.