Someone posted this comment on the neoseeker story that the OP linked to:
think the message was for those people who were proposing the indoctrination theory.
Sorry guys, the ending might be more shallow than what the indoctrination theorists might think.
The thing is, at least from what I've seen, the Indoctrination Theory seems like a credible explanation for what happens at the end of the game while at the same time not necessitating a major revamp of the content that BioWare has already released. All they'd have to do is a little more expansion on Shephard drawing a breath at the end of the "Best" ending, and *boom*, they've got a bridge to Mass Effect 4, or Mass Effect 3: Finish the Fight, or whatever they've got coming next.
Sure, a lot of people are going to get angry, but at least it'll make the ending make more narrative sense.
Annoying thing is, that I never got a drawing breath ending, even though I had almost all single player available resources, save for those guys who cant express emotions. Hell, i united entire f*ing galaxy, went full paragon, and yet I didn't see that ending. Fork you Bioware.
While I'm at it, what are real instructions to get that?
EDIT: I simply hate forum formatting.